GotCloud
Overview
GotCloud – Genomes on the Cloud – is a tool used in next generation sequencing and genotyping data.
Version 1.17.5 is installed on the CSF. It includes vcfCooker.
Restrictions on use
There are no restrictions on accessing the software on the CSF.
Set up procedure
We now recommend loading modulefiles within your jobscript so that you have a full record of how the job was run.
Load the following modulefile:
module load apps/gcc/gotcloud/1.17.5
Running the application
You MUST NOT run this software on the login node. Please create a batch job or use qrsh for interactive work.
Further info
Updates
None.