BWA

Overview

BWA (Burrows-Wheeler Aligner) is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome.

Versions 0.7.15 and 0.7.5a are installed on the iCSF. They were compiled with gcc 4.7.0.

Restrictions on use

BWA is open source. All iCSF users may access it.

Please acknowledge use of the softare in publications as per the BWA website.

Set up procedure

To access the software you must first load the modulefile:

module load apps/gcc/bwa/0.7.15

or

module load apps/gcc/bwa/0.7.5a

Running the application

Coming soon.

Further information

Updates

None.

Last modified on August 1, 2016 at 2:13 pm by Site Admin