fgwas

Overview

fgwas is a command line tool for integrating functional genomic information into a genome-wide association study (GWAS).

It is only available on incline256 and was compiled with gcc 8.3.0

Restrictions on use

fgwas is open source and has been made available under GNU GENERAL PUBLIC LICENSE Version 2. All iCSF users may access it.

Please acknowledge use of the software in publications.

Set up procedure

To access the software you must first load the modulefile:

module load apps/gcc/fgwas/0.3.6

***PLEASE NOTE this will load the necessary dependencies i.e. Boost & GNU Scientific Libraries

Further information

• • fgwas Github Page
  • User Guide

Updates

None.