{"id":124,"date":"2014-01-20T13:28:35","date_gmt":"2014-01-20T13:28:35","guid":{"rendered":"http:\/\/ri.itservices.manchester.ac.uk\/icsf\/?page_id=124"},"modified":"2016-08-01T14:13:21","modified_gmt":"2016-08-01T14:13:21","slug":"bwa","status":"publish","type":"page","link":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/software\/applications\/bwa\/","title":{"rendered":"BWA"},"content":{"rendered":"<h2>Overview<\/h2>\n<p>BWA (Burrows-Wheeler Aligner) is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome.<\/p>\n<p>Versions 0.7.15 and  0.7.5a are installed on the iCSF. They were compiled with gcc 4.7.0.<\/p>\n<h2>Restrictions on use<\/h2>\n<p>BWA is open source. All iCSF users may access it.<\/p>\n<p>Please acknowledge use of the softare in publications as per the <a href=\"http:\/\/bio-bwa.sourceforge.net\">BWA website<\/a>.<\/p>\n<h2>Set up procedure<\/h2>\n<p>To access the software you must first load the modulefile:<\/p>\n<pre>\r\nmodule load apps\/gcc\/bwa\/0.7.15\r\n\r\nor\r\n\r\nmodule load apps\/gcc\/bwa\/0.7.5a\r\n<\/pre>\n<h2>Running the application<\/h2>\n<p>Coming soon.<\/p>\n<h2>Further information<\/h2>\n<ul>\n<li><a href=\"http:\/\/bio-bwa.sourceforge.net\">BWA website<\/a><\/li>\n<\/ul>\n<h2>Updates<\/h2>\n<p>None.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Overview BWA (Burrows-Wheeler Aligner) is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. Versions 0.7.15 and 0.7.5a are installed on the iCSF. They were compiled with gcc 4.7.0. Restrictions on use BWA is open source. All iCSF users may access it. Please acknowledge use of the softare in publications as per the BWA website. Set up procedure To access the software you must first load the.. <a href=\"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/software\/applications\/bwa\/\">Read more &raquo;<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":43,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-124","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/pages\/124","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/comments?post=124"}],"version-history":[{"count":8,"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/pages\/124\/revisions"}],"predecessor-version":[{"id":663,"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/pages\/124\/revisions\/663"}],"up":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/pages\/43"}],"wp:attachment":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/icsf\/wp-json\/wp\/v2\/media?parent=124"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}