{"id":3606,"date":"2019-07-11T09:59:56","date_gmt":"2019-07-11T08:59:56","guid":{"rendered":"http:\/\/ri.itservices.manchester.ac.uk\/csf3\/?page_id=3606"},"modified":"2019-07-11T10:32:24","modified_gmt":"2019-07-11T09:32:24","slug":"wps","status":"publish","type":"page","link":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/software\/applications\/wps\/","title":{"rendered":"WPS"},"content":{"rendered":"<h2>Overview<\/h2>\n<p>WPS is the preprocessing system for the <a href=\"http:\/\/www2.mmm.ucar.edu\/wrf\/users\/\">Weather Research and Forecasting Model (WRF)<\/a>.<\/p>\n<p>Version 4.0.3 is installed on the CSF.<\/p>\n<h2>Restrictions on use<\/h2>\n<p>WRF is open source, and has been released with no restrictions on use (licensing or otherwise). <\/p>\n<h2>Set up procedure<\/h2>\n<p>We now recommend loading modulefiles within your jobscript so that you have a full record of how the job was run. See the example jobscript below for how to do this.<\/p>\n<p>Load one of the following modulefiles:<\/p>\n<pre>\r\nmodule load apps\/gcc\/wps\/4.0.3\r\n<\/pre>\n<p>Copy the running directory (which contains standard input files required by WPS) for your version of the model using:<\/p>\n<pre>\r\ncp -a $WPS_RUNDIR [scenario_name]\r\n<\/pre>\n<p>Change into the new directory, and link to the geography data directory:<\/p>\n<pre>\r\nln -s $WPS_GEOG geog\r\n<\/pre>\n<h2>Running the application<\/h2>\n<p>Please do not run the WPS processes on the login node &#8211; they are computationally intensive, and some require MPI parallisation to run properly. Jobs should be submitted to the compute nodes via batch.<\/p>\n<h3>Parallel batch job submission<\/h3>\n<p>Three example batch scripts are included in the running directory:<\/p>\n<pre>\r\nbatch_geogrid_par.sh\r\nbatch_ungrib_serial.sh\r\nbatch_metgrid_par.sh\r\n<\/pre>\n<p>These have the form (for parallel jobs):<\/p>\n<pre>\r\n#!\/bin\/bash --login\r\n#$ -cwd\r\n#$ -pe smp.pe 4\r\n\r\nmodule load apps\/gcc\/wps\/4.0.3\r\n\r\nmpiexec -np 4 geogrid.exe 2>&1 | tee geogrid.log\r\n<\/pre>\n<h2>Further info<\/h2>\n<ul>\n<li><a href=\"http:\/\/www2.mmm.ucar.edu\/wrf\/users\/\">WRF website<\/a><\/li>\n<\/ul>\n<h2>Updates<\/h2>\n<p>None.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Overview WPS is the preprocessing system for the Weather Research and Forecasting Model (WRF). Version 4.0.3 is installed on the CSF. Restrictions on use WRF is open source, and has been released with no restrictions on use (licensing or otherwise). Set up procedure We now recommend loading modulefiles within your jobscript so that you have a full record of how the job was run. See the example jobscript below for how to do this. Load.. <a href=\"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/software\/applications\/wps\/\">Read more &raquo;<\/a><\/p>\n","protected":false},"author":11,"featured_media":0,"parent":86,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-3606","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/pages\/3606","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/users\/11"}],"replies":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/comments?post=3606"}],"version-history":[{"count":4,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/pages\/3606\/revisions"}],"predecessor-version":[{"id":3610,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/pages\/3606\/revisions\/3610"}],"up":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/pages\/86"}],"wp:attachment":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf3\/wp-json\/wp\/v2\/media?parent=3606"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}