{"id":257,"date":"2013-04-24T14:18:06","date_gmt":"2013-04-24T14:18:06","guid":{"rendered":"http:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/?page_id=257"},"modified":"2018-06-25T07:24:23","modified_gmt":"2018-06-25T07:24:23","slug":"moe","status":"publish","type":"page","link":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/software\/applications\/moe\/","title":{"rendered":"MOE"},"content":{"rendered":"<h2>Overview<\/h2>\n<p>MOE (Molecular Operating Environment) is a fully integrated drug discovery software package. The vendor website gives an <a href=\"http:\/\/www.chemcomp.com\/software.htm\">overview of the product<\/a>.<\/p>\n<p>A number of versions are available &#8211; see Setup Procedure below.<\/p>\n<h2>Restrictions on use<\/h2>\n<p>This software is licensed for use by only one research group. You must be in the <code>moe<\/code> unix group to access the software.<\/p>\n<p>Only one copy of the software may be run at once anywhere on campus. i.e. two CSF users cannot use it at the same time, and equally one CSF user and a desktop user cannot use it at the same time. If the software is already in use you will see the error:<\/p>\n<pre>\r\n----------\r\nmoe: Can't check out license 'moe 2012.10':\r\n\r\nLicensed number of users already reached (-4)\r\n\r\n----------\r\n<\/pre>\n<h2>Set up procedure<\/h2>\n<p>To access the software please load the appropriate modulefile (the most recent version is listed first): <\/p>\n<pre class=\"in1\">\r\nmodule load apps\/binapps\/moe\/2016.0801 (16 March 2017 - not working, under investigation)\r\nmodule load apps\/binapps\/moe\/2016.08\r\nmodule load apps\/binapps\/moe\/2015.1001\r\nmodule load apps\/binapps\/moe\/2015.10\r\nmodule load apps\/binapps\/moe\/2014.09\r\nmodule load apps\/binapps\/moe\/2013.08\r\nmodule load apps\/binapps\/moe\/2012.10\r\nmodule load apps\/binapps\/moe\/2011.10\r\n<\/pre>\n<h2>Running the application<\/h2>\n<p>MOE is primarily a visualisation tool so you will need to connect to the CSF using: <\/p>\n<pre class=\"in1\">\r\nssh -X &#117;&#x73;e&#x72;&#x6e;&#97;&#x6d;e&#x40;&#x63;&#115;&#x66;&#46;&#x69;&#x74;&#115;&#x65;r&#x76;&#x69;&#99;&#x65;s&#x2e;&#x6d;&#97;&#x6e;c&#x68;&#x65;&#115;&#x74;e&#x72;&#x2e;&#97;&#x63;&#46;&#x75;&#x6b;\r\n  #\r\n  # That's an UPPERcase X\r\n<\/pre>\n<p>to have the display exported to your local desktop. See <a href=\"\/csf2\/getting-started-on-the-csf\/using-an-app-with-a-gui-x11-and-qrsh\/\">further information about how to start X-Windows and GUI applications on the CSF<\/a>.<\/p>\n<p>MOE should not be run directly on the login node &#8211; please use qrsh. for example:<\/p>\n<pre class=\"in1\">qrsh -V -l inter -l short moe<\/pre>\n<p>If you require longer than 1 hour of wallclock time replace &#8216;short&#8217; with &#8216;twoday&#8217;<\/p>\n<h2>Further info<\/h2>\n<p>Documentation, including tutorials, and release notes is available via the &#8216;Help&#8217; menu of the GUI. This documentation is searchable.<\/p>\n<h2>Updates<\/h2>\n<p>2014.09 was patched April 2015 &#8211; referred to as 2014.0901 above but loaded using the same modulefile as before.<\/p>\n<p>2014.09 was installed Dec 2014.<\/p>\n<p>2012.10 installed Dec 2012.<\/p>\n<p>2011.10 installed Sept 2012.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Overview MOE (Molecular Operating Environment) is a fully integrated drug discovery software package. The vendor website gives an overview of the product. A number of versions are available &#8211; see Setup Procedure below. Restrictions on use This software is licensed for use by only one research group. You must be in the moe unix group to access the software. Only one copy of the software may be run at once anywhere on campus. i.e. two.. <a href=\"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/software\/applications\/moe\/\">Read more &raquo;<\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":31,"menu_order":0,"comment_status":"open","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-257","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/pages\/257","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/comments?post=257"}],"version-history":[{"count":12,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/pages\/257\/revisions"}],"predecessor-version":[{"id":4722,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/pages\/257\/revisions\/4722"}],"up":[{"embeddable":true,"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/pages\/31"}],"wp:attachment":[{"href":"https:\/\/ri.itservices.manchester.ac.uk\/csf-apps\/wp-json\/wp\/v2\/media?parent=257"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}